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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34845652_34849069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34845652 - 34849069

Intron Length:

3418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTATCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTCTTTATCT

Flanking Amino Acid:

LSDQQKANVEAIMLAVMKKL

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.6

0.71

0.7

81.6

28.8

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

0.83

1.5

87.39

38.7

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000032105

34836522 - 34857775

21254

ENSAPLT00000025569

34836522 - 34857356

20835

ENSAPLT00000024288

34836599 - 34860642

24044

ENSAPLT00000047804

34836599 - 34860642

24044