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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34851255_34851413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34851255 - 34851413

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AAAGTACTAACT

Flanking Amino Acid:

ATALQDMMRTLVTSGVSAYQ

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.1

43.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

0.72

0.7

77.4

30.1

Minor 5ss

43.5

-0.7

2.9

58.6

45.6

Minor BPS

45.6

-0.2

1.9

62.38

40.9

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032105

34836522 - 34857775

21254

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000025569

34836522 - 34857356

20835

ENSAPLT00000024288

34836599 - 34860642

24044

ENSAPLT00000047804

34836599 - 34860642

24044

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000020507

34836522 - 34857775

21254