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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34855892_34857135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34855892 - 34857135

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TAATGTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTCCCTTTAATG

Flanking Amino Acid:

SGMSEVIANQGAENVERVLF

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

0.27

1.2

64.3

45.6

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

62.3

0.25

1.4

59.98

42.8

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020507

34836522 - 34857775

21254

ENSAPLT00000047804

34836599 - 34860642

24044

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000032105

34836522 - 34857775

21254

ENSAPLT00000024288

34836599 - 34860642

24044