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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34858010_34858843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34858010 - 34858843

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TATACTTGAACA

Flanking Amino Acid:

VTLKTIHLKRGPECIQYLQQ

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.3

38.5

Major BPS

60.7

0.27

65.3

28.1

Major PPT

82.2

0.72

0.7

81.2

30.9

Minor 5ss

43.7

-0.7

2.9

50.6

46.1

Minor BPS

66.5

0.51

1.4

74.6

36.3

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000047804

34836599 - 34860642

24044