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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34858916_34860021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34858916 - 34860021

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTACTTATTT

Flanking Amino Acid:

SLQVAPEIIQEFCQALQQPD

Intron Amino Acid Position:

936

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

88.9

0.88

0.6

83.7

24.6

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

65.2

0.55

1.8

83.5

37.5

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047804

34836599 - 34860642

24044

ENSAPLT00000008445

34836522 - 34860846

24325