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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3486357_3492461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3486357 - 3492461

Intron Length:

6105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

ATCATTGCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTGTTGTTATCA

Flanking Amino Acid:

ENKYRMDPPADIYSLKTVSE

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

69.4

0.44

0.9

66.4

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

51.2

0.04

2.3

70.29

42.5

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338