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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34871651_34872462_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34871651 - 34872462

Intron Length:
812

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTA|GTAAGCCCG

5'SS Class:
major

3'SS Sequence:
TTTTTTCAATTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTCAATT

Flanking Amino Acid:
VSLYGTEEYLHPDMYERAVL

Intron Amino Acid Position:
181

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68
0.43
1.1
52.7
44.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.8
0.63
0.9
79.8
32.6

Minor 5ss
40
-1.1
3
50.8
40.6

Minor BPS
71.4
0.75
1.4
87.38
32.1

Associated Gene:

Gene:
TBK1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34867064 - 34886708
19645

34868763 - 34886708
17946