Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34884919_34885033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34884919 - 34885033

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGGGTAAT

5'SS Class:

major

3'SS Sequence:

TTTGTTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATTCCTAATTT

Flanking Amino Acid:

NQEGMHPRDRNPERLQALLC

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

76.8

33.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

77.6

0.62

0.9

70.2

41.3

Minor 5ss

32.3

-2

3.1

41.5

39.4

Minor BPS

56.7

0.29

1.9

75.44

41.6

Associated Gene:

Gene:

TBK1

Ensembl Gene ID:

ENSAPLG00000008445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024099

34867064 - 34886708

19645

ENSAPLT00000008827

34868763 - 34886708

17946