Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34885111_34885442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34885111 - 34885442

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTGCTCTTATCC

Flanking Amino Acid:

YQFKKDKAERRLPYNEEQIH

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.45

0.9

62.2

38.5

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

55.4

0.15

1.7

62.95

42.8

Associated Gene:

Gene:

TBK1

Ensembl Gene ID:

ENSAPLG00000008445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024099

34867064 - 34886708

19645

ENSAPLT00000008827

34868763 - 34886708

17946