Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34922830_34922942_F

Intron Information:

Intron Rank:

124756

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34922830 - 34922942

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

GAG|GTGGGAGTC

5'SS Class:

major

3'SS Sequence:

TTTGCATTTTCAA|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTGTGCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

69.4

35.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

45.8

-0.2

3.2

73.9

40.6

Minor 5ss

28.2

-2.5

3.6

40.3

46.1

Minor BPS

45.4

-0.2

2.3

68.49

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019272

34922617 - 34923369

753