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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3492709_3495870_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3492709 - 3495870

Intron Length:

3162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTATGTATT

5'SS Class:

weak_major

3'SS Sequence:

TCTATTCAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTCTATTCAAAC

Flanking Amino Acid:

RTAPANLLEGPLRGKNPVDL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.3

74.4

41.9

Major BPS

0.82

0.8

83.9

25.3

Major PPT

70.6

0.46

66.5

38.5

Minor 5ss

48.7

-0.1

2.5

40.7

Minor BPS

-0

1.8

64.84

40.6

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618