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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3495960_3522524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3495960 - 3522524

Intron Length:

26565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCACCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCTTCCCTCACC

Flanking Amino Acid:

QNNKVLMPPDAIKEKYVDWT

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

75.8

0.58

0.8

69.4

30.9

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

59.5

0.28

2.1

75.12

41.7

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338