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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35026633_35050783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35026633 - 35050783

Intron Length:

24151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TCACGATTATTT

Flanking Amino Acid:

ACLQAVSQKRWVDTKLKFTL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

76.8

0.67

40.9

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

42.9

-0.4

2.1

59.24

44.1

Associated Gene:

Gene:

TBC1D30

Ensembl Gene ID:

ENSAPLG00000013135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041146

35024121 - 35073201

49081

ENSAPLT00000017783

35024121 - 35073201

49081