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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35053866_35055360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35053866 - 35055360

Intron Length:

1495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTCAAC

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TCTTCTTTAAAG

Flanking Amino Acid:

DDSMGIQIVKDLHRTGCSSY

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

65.1

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

80.5

0.69

27.3

Minor 5ss

38.4

-1.3

3.1

51.2

45.6

Minor BPS

72.1

0.56

1.4

72.3

40.7

Associated Gene:

Gene:

TBC1D30

Ensembl Gene ID:

ENSAPLG00000013135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017783

35024121 - 35073201

49081

ENSAPLT00000013675

35043861 - 35073201

29341

ENSAPLT00000041146

35024121 - 35073201

49081