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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35063330_35068363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35063330 - 35068363

Intron Length:

5034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

SLIDSNELMQTVYTMAQFPF

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

TBC1D30

Ensembl Gene ID:

ENSAPLG00000013135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013675

35043861 - 35073201

29341

ENSAPLT00000041146

35024121 - 35073201

49081

ENSAPLT00000017783

35024121 - 35073201

49081