Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_35070695_35070892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35070695 - 35070892

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATAT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGTAAATGAAAC

Flanking Amino Acid:

QQAHHVYIRAGSEDDDPGIF

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

77.7

33.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.8

0.76

0.9

84.7

30.2

Minor 5ss

45.2

-0.5

64.8

46.5

Minor BPS

44.1

-0.4

1.9

57.39

39.7

Associated Gene:

Gene:

TBC1D30

Ensembl Gene ID:

ENSAPLG00000013135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017783

35024121 - 35073201

49081

ENSAPLT00000013675

35043861 - 35073201

29341