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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35250170_35251968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35250170 - 35251968

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTATTTTTAAAA

Flanking Amino Acid:

YHVTQEKGTESAFEGEYTHH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.1

0.7

0.9

73.3

41.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

71.1

0.66

1.3

76.99

33.4

Associated Gene:

Gene:

MSRB3

Ensembl Gene ID:

ENSAPLG00000026297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035576

35237118 - 35298974

61857

ENSAPLT00000028896

35231722 - 35299024

67303