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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35411257_35416742_F

Intron Information:

Intron Rank:

142442

Intron Class:

major

Intron Phase:

Intron Coordinates:

35411257 - 35416742

Intron Length:

5486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGGGTAGA

5'SS Class:

major

3'SS Sequence:

TTTAACTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GTTTTTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

74.2

0.54

0.9

66.3

40.3

Minor 5ss

30.7

-2.2

36.8

40.9

Minor BPS

1.11

92.13

30.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021333

35410782 - 35438810

28029

ENSAPLT00000019130

35410782 - 35416958

6177