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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35696991_35703378_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
35696991 - 35703378

Intron Length:
6388

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCTGTAAT

5'SS Class:
major

3'SS Sequence:
ATTACCTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
TTTTTCCTACCT

Flanking Amino Acid:
MSPTPVELHKVTLYKDSDGE

Intron Amino Acid Position:
878

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.3
79.7
35.4

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
77.5
0.62
0.9
70.6
35.4

Minor 5ss
38.9
-1.2
2.6
51.1
45.4

Minor BPS
63.8
0.51
1.9
88.18
37

Associated Gene:

Gene:
GRIP1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35695555 - 35799392
103838