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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35697066_35706248_R


Intron Information:

Intron Rank:
16

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
35697066 - 35706248

Intron Length:
9183

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGAACAA

5'SS Class:
major

3'SS Sequence:
GCCTAGGAAGGAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ACATGAA

U12 Branch Point Sequence:
CGAACATGAACT

Flanking Amino Acid:
GQSGILRELETCQVLVEMWT

Intron Amino Acid Position:
805

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.1
61.1
39.5

Major BPS
54.1
0.1
1.1
45.7
37.1

Major PPT
41.4
-0.5
1.7
35.6
39.1

Minor 5ss
29.2
-2.4
3.3
38.1
46.8

Minor BPS
48.9
0
1.8
65.21
44.1

Associated Gene:

Gene:
GRIP1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35693300 - 35776941
83642

35693300 - 35775711
82412