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Intron Name: Anas_platyrhynchos_platyrhynchos_1_35765078_35766452_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
35765078 - 35766452

Intron Length:
1375

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAATTC

5'SS Class:
major

3'SS Sequence:
AATCTCCTTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
ATTCCTTTAATC

Flanking Amino Acid:
TCVRPGGPADREGTIKPGDR

Intron Amino Acid Position:
192

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.7
0.56
1
69.5
36.2

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
78.6
0.64
0.9
74.4
35.4

Minor 5ss
40.8
-1
3.4
59.1
45.6

Minor BPS
75.4
0.78
1.1
78.18
30.7

Associated Gene:

Gene:
GRIP1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35693300 - 35775711
82412

35693300 - 35776941
83642

35695555 - 35799392
103838