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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3585527_3586454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3585527 - 3586454

Intron Length:

928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGCTT

5'SS Class:

major

3'SS Sequence:

TCCTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCACAA

U12 Branch Point Sequence:

TTTTCCTTCCCT

Flanking Amino Acid:

PKEERRPWRIWFYDTSKQAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

0.9

71.3

40.1

Major BPS

59.7

0.24

29.8

Major PPT

81.9

0.72

0.7

73.4

31.6

Minor 5ss

31.4

-2.1

3.5

44.3

44.6

Minor BPS

49.9

0.08

3.7

91.67

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025282

3574867 - 3600632

25766

ENSAPLT00000015242

3574867 - 3606402

31536