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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3597695_3598423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3597695 - 3598423

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

LVLLIPGWTKLQQILLSYIP

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

75.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.63

0.8

71.5

33.1

Minor 5ss

45.1

-0.5

2.8

44.7

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025282

3574867 - 3600632

25766

ENSAPLT00000015242

3574867 - 3606402

31536