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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3611662_3612911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3611662 - 3612911

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAA

U12 Branch Point Sequence:

AACCACTCAAAG

Flanking Amino Acid:

GLSSDSHGLLGQFLNHEVKL

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

65.6

0.39

0.9

67.3

29.6

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

43.5

-0.6

1.8

43.77

40.7

Associated Gene:

Gene:

ITIH5

Ensembl Gene ID:

ENSAPLG00000014292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024710

3589265 - 3656221

66957

ENSAPLT00000014887

3609058 - 3656221

47164