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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3616964_3617334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3616964 - 3617334

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

TGCTCAGTAACA

Flanking Amino Acid:

QSLQGHKAPPGIRRQQDTQR

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

67.8

37.5

Major BPS

54.4

0.11

1.2

36.4

Major PPT

66.6

0.37

0.8

Minor 5ss

35.9

-1.6

3.3

47.3

48.1

Minor BPS

51.5

0.04

2.3

69.26

42.8

Associated Gene:

Gene:

ITIH5

Ensembl Gene ID:

ENSAPLG00000014292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024710

3589265 - 3656221

66957

ENSAPLT00000014887

3609058 - 3656221

47164