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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36408906_36409311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36408906 - 36409311

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

CCCTCCCCACCC

Flanking Amino Acid:

REATKRRSFRPDVEMKAVSL

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

38.4

Major BPS

52.4

0.06

1.3

41.7

Major PPT

0.72

0.8

80.7

31.3

Minor 5ss

29.2

-2.4

2.5

25.1

36.7

Minor BPS

42.9

-0.5

2.1

50.84

46.1

Associated Gene:

Gene:

MDM1

Ensembl Gene ID:

ENSAPLG00000012567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045679

36404512 - 36429483

24972

ENSAPLT00000023880

36404512 - 36429483

24972

ENSAPLT00000013099

36404512 - 36429483

24972