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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36420555_36425493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36420555 - 36425493

Intron Length:

4939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTAAAAT

Flanking Amino Acid:

EKSPILAAEERKREEPLHKP

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.4

0.62

0.8

77.1

31.6

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

59.2

0.37

1.7

77.65

38.8

Associated Gene:

Gene:

MDM1

Ensembl Gene ID:

ENSAPLG00000012567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023880

36404512 - 36429483

24972