Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_3648813_3652647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3648813 - 3652647

Intron Length:

3835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTGATATCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCTGTTAATG

Flanking Amino Acid:

PRQTRFLQRLETRPRMSEFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.8

0.6

0.9

69.8

40.5

Minor 5ss

46.5

-0.4

2.5

59.7

39.2

Minor BPS

50.2

-0.1

2.1

59.73

42.8

Associated Gene:

Gene:

ITIH5

Ensembl Gene ID:

ENSAPLG00000014292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024710

3589265 - 3656221

66957

ENSAPLT00000014887

3609058 - 3656221

47164