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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36522406_36525179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36522406 - 36525179

Intron Length:

2774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TTTCTCTTAACA

Flanking Amino Acid:

DPTIEDSYRKQVEVDAQQCM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

84.4

0.77

0.8

81.1

29.4

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

1.06

88.68

27.3

Associated Gene:

Gene:

RAP1B

Ensembl Gene ID:

ENSAPLG00000012353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012899

36520870 - 36531844

10975