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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36525237_36527168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36525237 - 36527168

Intron Length:

1932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

MLEILDTAGTEQFTAMRDLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.2

34.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.8

81.9

33.4

Minor 5ss

41.6

-0.9

2.6

51.2

45.5

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

RAP1B

Ensembl Gene ID:

ENSAPLG00000012353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012899

36520870 - 36531844

10975