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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3652693_3656101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3652693 - 3656101

Intron Length:

3409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

TTACTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

GCTCCATTAACT

Flanking Amino Acid:

LMADYSVVEQVVRRVPRQTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

81.6

33.2

Major BPS

69.5

0.49

71.3

30.3

Major PPT

85.6

0.8

81.1

30.6

Minor 5ss

46.5

-0.4

3.1

66.5

Minor BPS

0.61

1.6

79.89

41.4

Associated Gene:

Gene:

ITIH5

Ensembl Gene ID:

ENSAPLG00000014292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024710

3589265 - 3656221

66957

ENSAPLT00000014887

3609058 - 3656221

47164