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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36527310_36529270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36527310 - 36529270

Intron Length:

1961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

AAATTGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGGTATTAAATT

Flanking Amino Acid:

QILRVKDTDDVPMILVGNKC

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

83.8

34.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

67.5

0.4

63.4

42.9

Minor 5ss

47.7

-0.2

2.9

71.4

38.6

Minor BPS

50.8

0.1

1.8

69.09

42.4

Associated Gene:

Gene:

RAP1B

Ensembl Gene ID:

ENSAPLG00000012353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012899

36520870 - 36531844

10975