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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36541433_36543094_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

36541433 - 36543094

Intron Length:

1662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

ATTTGTTAATCAG|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TGTTTCTTAACG

Flanking Amino Acid:

RRQGSQKRVPVFTSLDDSIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.2

57.1

Major BPS

82.2

0.8

71.9

35.8

Major PPT

72.3

0.5

71.6

42.6

Minor 5ss

86.7

1.24

1.3

85.2

32.2

Minor BPS

81.4

0.85

1.2

79.89

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548