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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36548307_36548811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36548307 - 36548811

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

ATATGTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTCTTCTTATAT

Flanking Amino Acid:

LLREDDPGEAATMSMYSDFL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

71.8

28.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

69.1

0.43

45.2

Minor 5ss

31.9

-2.1

42.5

Minor BPS

56.6

0.29

1.8

72.21

44.9

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548