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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36549898_36550220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36549898 - 36550220

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATC

Flanking Amino Acid:

VTWRLLSALYRDRIQSALED

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.7

77.8

35.6

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

0.7

1.1

78.22

31.1

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548