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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36553152_36554319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36553152 - 36554319

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

ATTGTGTGAATG

Flanking Amino Acid:

GSSRALVTELDPDAPIRQKL

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

44.7

-0.5

2.2

53.66

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012333

36541138 - 36569685

28548

ENSAPLT00000039114

36541138 - 36569685

28548