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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36554434_36556370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36554434 - 36556370

Intron Length:

1937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

CATTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

AAGTCCATTACT

Flanking Amino Acid:

TLIRAGMKDEAQRLCKRCGQ

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

83.5

0.75

0.8

80.5

36.7

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

54.4

0.22

1.9

72.75

43.7

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012333

36541138 - 36569685

28548

ENSAPLT00000039114

36541138 - 36569685

28548