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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36556462_36557481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36556462 - 36557481

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTGCT

5'SS Class:

major

3'SS Sequence:

CCTTTGCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTGTTTAATT

Flanking Amino Acid:

KLYHDPNRNGGRELEPVEGN

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.2

71.5

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.47

0.9

65.3

35.4

Minor 5ss

-0.3

2.9

68.1

42.9

Minor BPS

70.3

0.72

1.7

85.82

34.8

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548