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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36557559_36558105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36557559 - 36558105

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAACT

Flanking Amino Acid:

KISCWRMAEEEQFNRYERAI

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.8

0.58

0.9

35.3

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

64.2

0.52

1.5

77.92

38.8

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548