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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36561364_36561804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36561364 - 36561804

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TGGGTGTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TGACTAATAACA

Flanking Amino Acid:

QKFIILGDVDGLMEEFSKWL

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.6

34.9

Major BPS

70.1

0.5

70.3

31.9

Major PPT

69.3

0.44

61.2

44.7

Minor 5ss

44.5

-0.6

3.1

61.3

44.6

Minor BPS

47.6

-0.1

1.8

61.02

37.8

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548