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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36561924_36564198_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36561924 - 36564198

Intron Length:

2275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCAATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATACAAAT

Flanking Amino Acid:

FFRTLGLQTKEEVSVEVLKT

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

57.5

0.17

1.2

62.4

42.7

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

44.4

-0.3

68.8

41.3

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012333

36541138 - 36569685

28548

ENSAPLT00000039114

36541138 - 36569685

28548