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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36565359_36566353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36565359 - 36566353

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGGCTTTTACA

Flanking Amino Acid:

DHMLDTGTTEVDRLKIDVID

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

82.1

0.72

0.9

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

59.8

0.3

1.8

70.62

41.9

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548