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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36566869_36567118_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36566869 - 36567118

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CAATGCAATCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTGTTCCCAATG

Flanking Amino Acid:

REHLCIRAYLEAHETFNEWF

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

59.3

0.21

1.1

48.4

43.6

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

48.9

-0.2

1.9

59.79

42.5

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548