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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36568083_36568378_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36568083 - 36568378

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTACACTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATATTCATAATA

Flanking Amino Acid:

DGGWMVDVREDAEDDPERTH

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

57.9

0.18

1.1

61.7

38.4

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

62.5

0.39

1.5

71.38

34.2

Associated Gene:

Gene:

NUP107

Ensembl Gene ID:

ENSAPLG00000011758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039114

36541138 - 36569685

28548

ENSAPLT00000012333

36541138 - 36569685

28548