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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36611309_36612498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36611309 - 36612498

Intron Length:

1190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CAAACAGTAACG

Flanking Amino Acid:

KVPHCYYSRGRYNKNGEDLN

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

54.4

0.11

1.2

36.4

Major PPT

0.52

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

43.1

-0.6

2.3

47.59

44.8

Associated Gene:

Gene:

CPM

Ensembl Gene ID:

ENSAPLG00000011100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046420

36607046 - 36637763

30718

ENSAPLT00000011572

36573855 - 36637763

63909