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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36619104_36637471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36619104 - 36637471

Intron Length:

18368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTTTGTTTAAAA

Flanking Amino Acid:

HLHSIGRSVEGRDLWVLVLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.8

39.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.45

28.3

Minor 5ss

31.6

-2.1

3.3

40.8

45.6

Minor BPS

59.9

0.31

1.9

71.99

40.5

Associated Gene:

Gene:

CPM

Ensembl Gene ID:

ENSAPLG00000011100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046420

36607046 - 36637763

30718

ENSAPLT00000011572

36573855 - 36637763

63909