Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_36694722_36702210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

36694722 - 36702210

Intron Length:

7489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TGACACATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CAAATTTTGACA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

67.2

0.39

58.5

41.4

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

0.05

1.3

55.66

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023649

36677990 - 36702370

24381

ENSAPLT00000011341

36677990 - 36702370

24381