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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36784234_36785148_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36784234 - 36785148

Intron Length:
915

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGTATG

5'SS Class:
major

3'SS Sequence:
CTACTCGAATCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTGCTTATTT

Flanking Amino Acid:
EAPRTPRTPTTPGFNAQSLP

Intron Amino Acid Position:
138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
75.9
39.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
60.9
0.25
1.1
59.4
40.6

Minor 5ss
41.5
-0.9
2.8
57.1
41.1

Minor BPS
65.7
0.57
2
87.57
38.6

Associated Gene:

Gene:
FRS2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36775929 - 36788591
12663