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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36802010_36802208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36802010 - 36802208

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTACTA

Flanking Amino Acid:

GSLADSYLDEGFLLDKKIGV

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

0.9

73.1

36.1

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

72.8

0.71

1.5

82.43

32.9

Associated Gene:

Gene:

CCT2

Ensembl Gene ID:

ENSAPLG00000013136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013735

36797007 - 36809000

11994