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Intron Name: Anas_platyrhynchos_platyrhynchos_1_36807800_36808568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36807800 - 36808568

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTCTTTTTAAAG

Flanking Amino Acid:

HSEGKSTYGLDMKEGTIGDM

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

79.9

0.67

81.5

27.9

Minor 5ss

-2.2

3.6

43.1

45.5

Minor BPS

58.8

0.14

1.5

59.29

43.1

Associated Gene:

Gene:

CCT2

Ensembl Gene ID:

ENSAPLG00000013136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013735

36797007 - 36809000

11994